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Updated: Saturday May 25, 7:14 AM
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| Rank | Player | Team | G | Att | Cmp | Comp Pct. | Yards | Int | Yds/Att | TD | Rating |
| 1 | Kyle Essington | Stony Brook | 12 | 205 | 120 | 58.5 | 2032 | 8 | 9.9 | 23 | 171.0 |
| 2 | Taylor Heinicke | Old Dominion | 13 | 579 | 398 | 68.7 | 5076 | 14 | 8.8 | 44 | 162.6 |
| 3 | Colton Chapple | Harvard | 10 | 294 | 194 | 66.0 | 2567 | 7 | 8.7 | 24 | 161.5 |
| 4 | Vernon Adams | Eastern Washington | 12 | 215 | 131 | 60.9 | 1961 | 8 | 9.1 | 20 | 160.8 |
| 5 | Chuckie Looney | Marist | 10 | 248 | 150 | 60.5 | 2315 | 8 | 9.3 | 18 | 156.4 |
| 6 | T.J. Pryor | Eastern Kentucky | 10 | 213 | 123 | 57.7 | 1929 | 3 | 9.1 | 15 | 154.2 |
| 7 | Mason Mills | San Diego | 11 | 360 | 252 | 70.0 | 3106 | 12 | 8.6 | 20 | 154.1 |
| 8 | Gavin McCarney | Colgate | 12 | 256 | 159 | 62.1 | 2372 | 8 | 9.3 | 15 | 153.0 |
| 9 | Brian Bell | Sam Houston State | 15 | 322 | 197 | 61.2 | 2715 | 10 | 8.4 | 25 | 151.4 |
| Thomas Wilson | Elon | 11 | 381 | 249 | 65.4 | 3161 | 10 | 8.3 | 25 | 151.4 | |
| 11 | Derek Carr | UTM | 11 | 415 | 264 | 63.6 | 3276 | 8 | 7.9 | 31 | 150.7 |
| 12 | Jamal Jackson | Appalachian State | 12 | 406 | 268 | 66.0 | 3278 | 8 | 8.1 | 21 | 147.0 |
| 13 | Wynrick Smothers | Central Arkansas | 12 | 427 | 277 | 64.9 | 3103 | 9 | 7.3 | 31 | 145.7 |
| 14 | Casey Brockman | Murray State | 11 | 517 | 359 | 69.4 | 3729 | 10 | 7.2 | 28 | 144.0 |
| Kyle Padron | Eastern Washington | 11 | 296 | 175 | 59.1 | 2491 | 7 | 8.4 | 17 | 144.0 | |
| 16 | Cody Stroud | McNeese State | 11 | 278 | 170 | 61.2 | 2102 | 5 | 7.6 | 19 | 143.6 |
| 17 | Zach Lewis | Morehead State | 11 | 402 | 266 | 66.2 | 2955 | 11 | 7.4 | 25 | 143.0 |
| Andy Vailas | New Hampshire | 11 | 217 | 126 | 58.1 | 1558 | 3 | 7.2 | 18 | 143.0 | |
| 19 | Cary Grossart | Northern Arizona | 9 | 270 | 180 | 66.7 | 1997 | 9 | 7.4 | 17 | 142.9 |
| Aramis Hillary | Coastal Carolina | 12 | 352 | 226 | 64.2 | 2665 | 8 | 7.6 | 21 | 142.9 | |
| 21 | Grant Enders | Towson | 11 | 317 | 208 | 65.6 | 2337 | 8 | 7.4 | 19 | 142.3 |
| 22 | Damien Fleming | Florida A&M | 11 | 308 | 214 | 69.5 | 2157 | 5 | 7.0 | 16 | 142.2 |
| Sawyer Kollmorgen | UNI | 11 | 313 | 185 | 59.1 | 2460 | 8 | 7.9 | 21 | 142.2 | |
| 24 | Matt Brown | Illinois State | 13 | 439 | 272 | 62.0 | 3370 | 12 | 7.7 | 27 | 141.3 |
| 25 | Denarius McGhee | Montana State | 13 | 430 | 284 | 66.0 | 3154 | 11 | 7.3 | 24 | 141.0 |
| 26 | Mike Colvin | Lehigh | 11 | 369 | 227 | 61.5 | 3108 | 16 | 8.4 | 19 | 140.6 |
| 27 | Matt Lancaster | Butler | 11 | 361 | 217 | 60.1 | 2703 | 3 | 7.5 | 21 | 140.5 |
| 28 | Kurt Hess | Youngstown State | 11 | 278 | 176 | 63.3 | 2112 | 7 | 7.6 | 15 | 139.9 |
| 29 | John Robertson | Villanova | 12 | 253 | 152 | 60.1 | 1965 | 7 | 7.8 | 14 | 138.0 |
| 30 | Marques Ivory | Jacksonville State | 11 | 265 | 152 | 57.4 | 2077 | 7 | 7.8 | 16 | 137.8 |
| 31 | Jeff Mathews | Cornell | 9 | 405 | 251 | 62.0 | 3196 | 11 | 7.9 | 18 | 137.5 |
| 32 | Josh Woodrum | Liberty | 11 | 267 | 183 | 68.5 | 1966 | 9 | 7.4 | 11 | 137.2 |
| 33 | Ryan Higgins | Fordham | 11 | 387 | 255 | 65.9 | 2940 | 9 | 7.6 | 14 | 137.0 |
| 34 | Dray Joseph | Southern University | 11 | 359 | 210 | 58.5 | 2511 | 7 | 7.0 | 25 | 136.3 |
| 35 | Michael German | Tennessee State | 11 | 358 | 215 | 60.1 | 2751 | 10 | 7.7 | 18 | 135.6 |
| 36 | Brad Sorensen | Southern Utah | 11 | 439 | 273 | 62.2 | 3139 | 10 | 7.2 | 23 | 135.0 |
| 37 | Mike Piatkowski | Drake | 11 | 452 | 282 | 62.4 | 3273 | 10 | 7.2 | 22 | 134.9 |
| 38 | Jimmy Garoppolo | Eastern Illinois | 12 | 540 | 331 | 61.3 | 3823 | 15 | 7.1 | 31 | 134.2 |
| 39 | Jacob Huesman | Chattanooga | 11 | 256 | 167 | 65.2 | 1707 | 5 | 6.7 | 13 | 134.1 |
| 40 | Nick Doscher | Wagner | 13 | 241 | 131 | 54.4 | 1794 | 1 | 7.4 | 13 | 133.9 |
| 41 | Marcus Wasilewski | Maine | 11 | 338 | 206 | 60.9 | 2364 | 11 | 7.0 | 21 | 133.7 |
| 42 | Justin Thorpe | James Madison | 10 | 205 | 127 | 62.0 | 1529 | 9 | 7.5 | 11 | 133.5 |
| 43 | Kyle Frazier | Monmouth | 10 | 365 | 246 | 67.4 | 2431 | 10 | 6.7 | 17 | 133.2 |
| 44 | Benjamin Anderson | Arkansas-Pine Bluff | 12 | 299 | 174 | 58.2 | 2346 | 13 | 7.8 | 16 | 133.1 |
| Alex Park | Dartmouth | 8 | 179 | 112 | 62.6 | 1370 | 6 | 7.7 | 7 | 133.1 | |
| 46 | Garrett Safron | Sacramento State | 11 | 383 | 246 | 64.2 | 2540 | 12 | 6.6 | 22 | 132.6 |
| 47 | John Kelly | Saint Francis U | 11 | 198 | 108 | 54.5 | 1351 | 4 | 6.8 | 14 | 131.2 |
| 48 | Brock Jensen | North Dakota State | 15 | 338 | 207 | 61.2 | 2331 | 8 | 6.9 | 17 | 131.0 |
| 49 | Lucas Beatty | Gardner-Webb | 11 | 334 | 215 | 64.4 | 2483 | 13 | 7.4 | 12 | 130.9 |
| 50 | DeAunte Mason | Alabama A&M | 11 | 298 | 173 | 58.1 | 2066 | 5 | 6.9 | 16 | 130.7 |

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